Bookmarks
Synthetic dataset - Using data-driven ML towards improving diagnosis of ACS
Population Size
990
People
Years
2004 - 2022
Associated BioSamples
None/not available
Geographic coverage
United Kingdom
England
Lead time
Not applicable
Summary
Documentation
Background Acute compartment syndrome (ACS) is an emergency orthopaedic condition wherein a rapid rise in compartmental pressure compromises blood perfusion to the tissues leading to ischaemia and muscle necrosis. This serious condition is often misdiagnosed or associated with significant diagnostic delay, and can lead to limb amputations and death.
The most common causes of ACS are high impact trauma, especially fractures of the lower limbs which account for 40% of ACS cases. ACS is a challenge to diagnose and treat effectively, with differing clinical thresholds being utilised which can result in unnecessary osteotomy. The highly granular synthetic data for over 900 patients with ACS provide the following key parameters to support critical research into this condition:
- Patient data (injury type, location, age, sex, pain levels, pre-injury status and comorbidities)
- Physiological parameters (intracompartmental pressure, pH, tissue oxygenation, compartment hardness)
- Muscle biomarkers (creatine kinase, myoglobin, lactate dehydrogenase)
- Blood vessel damage biomarkers (glycocalyx shedding markers, endothelial permeability markers)
PIONEER geography: The West Midlands (WM) has a population of 5.9 million & includes a diverse ethnic & socio-economic mix. UHB is one of the largest NHS Trusts in England, providing direct acute services & specialist care across four hospital sites, with 2.2 million patient episodes per year, 2750 beds & an expanded 250 ITU bed capacity during COVID. UHB runs a fully electronic healthcare record (EHR) (PICS; Birmingham Systems), a shared primary & secondary care record (Your Care Connected) & a patient portal “My Health”.
Scope: Enabling data-driven research and machine learning models towards improving the diagnosis of Acute compartment syndrome. Longitudinal & individually linked, so that the preceding & subsequent health journey can be mapped & healthcare utilisation prior to & after admission understood. The dataset includes highly granular patient demographics, physiological parameters, muscle biomarkers, blood biomarkers and co-morbidities taken from ICD-10 & SNOMED-CT codes. Serial, structured data pertaining to process of care (timings and admissions), presenting complaint, lab analysis results (eGFR, troponin, CRP, INR, ABG glucose), systolic and diastolic blood pressures, procedures and surgery details.
Available supplementary data: ACS cohort, Matched controls; ambulance, OMOP data. Available supplementary support: Analytics, Model build, validation & refinement; A.I.; Data partner support for ETL (extract, transform & load) process, Clinical expertise, Patient & end-user access, Purchaser access, Regulatory requirements, Data-driven trials, “fast screen” services.
Keywords
Observations
Observed Node | Disambiguating Description | Measured Value | Measured Property | Observation Date |
---|---|---|---|---|
Persons | 990 spells for patients with Acute Compartment Syndrome between 30/06/2004 and 26/06/2022 | 990 | Count | 21 Jul 2022 |
Provenance
Structural Metadata
Details
08/10/2024
09/10/2023
Coverage
29/06/2004
25/06/2022
Accessibility
Data Access Request
Trusted Research Environments (TRE) are built using Microsoft Azure services and hosted in the UK to provide research teams a safe, secure and agile environment which allows users to quickly analyse, interpret and form an enriched view of primary care information through a range of integrated datasets.
Health data collated from multiple sources is ingested into a secure data lake which will then allow subsets of data to be made available to research teams on approval of a data request. Once approved a customer specific TRE is made available with a standard set of leading analytical tools from Microsoft including Azure Databricks, Azure Machine Learning, Azure SQL and Azure Synapse (for large-scale data warehouses). Specific tools can be provided at an additional cost over the standard platform data access charge and the PIONEER team will work with you to determine your exact needs.
Access to the TRE is managed using the latest virtual desktop technology to provide a safe and secure end-user experience. By utilising leading edge design PIONEER are able to create TREs rapidly to enable us to service any customer requirement.