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SGSS data for QResearch

Population Size

Not reported

Years

1997 - 2021

Associated BioSamples

None/not available

Geographic coverage

United Kingdom

England

Lead time

Not applicable

Summary

QResearch GP data is linked to Second Generation Surveillance System (SGSS) data contains SARS-CoV-2 testing (swab samples, PCR test method) offered to those in hospital and NHS key workers (i.e. Pillar 1) and includes positive tests results only

Documentation

Second Generation Surveillance System (SGSS) data contains SARS-CoV-2 testing (swab samples, PCR test method) offered to those in hospital and NHS key workers (i.e. Pillar 1) and includes positive tests results only.
Dataset type
Health and disease
Dataset sub-type
Not applicable

Keywords

QResearch, SGSS, SARS-CoV-2, National Core Study, NCS

Observations

Observed Node
Disambiguating Description
Measured Value
Measured Property
Observation Date

Events

35000000

count

04 Feb 2022

Provenance

Purpose of dataset collection
Care
Source of data extraction
EPR
Collection source setting
Community, Secondary care - In-patients, Primary care - Clinic
Patient pathway description
Data forming the Covid-19 Second Generation Surveillance Systems data set relate to demographic and diagnostic information from Pillar 1 swab testing in PHE labs and NHS hospitals and Pillar 2 Swab testing in the community.
Image contrast
Not stated
Biological sample availability
None/not available

Structural Metadata

Details

Publishing frequency
Monthly
Version
2.0.0
Modified

08/10/2024

Citation Requirements
NHS Digital

Coverage

Start date

01/04/1997

End date

31/03/2021

Time lag
1-2 months
Geographic coverage
United Kingdom, England
Maximum age range
150
Follow-up
6 - 12 Months

Accessibility

Language
en
Controlled vocabulary
SNOMED CT
Format
CSV, TSV, Stata, SQL Server Database

Data Access Request

Dataset pipeline status
Not available
Time to dataset access
Not applicable
Access method category
TRE/SDE
Access service description

Remote Desktop to dedicated Windows Server.

Standard Server Spec: 16GB RAM, 4 Logical Xeon Gold Processors, 200 GB HDD

Max available Server Spec: 512GB RAM, 72 Logical Xeon Gold Processors, 2TB HDD. Tesla V100 GPU

Jurisdiction
GB-ENG
Data use limitation
Research-specific restrictions,Research use only
Data use requirements
Ethics approval required,Not for profit use
Data Controller
University of Oxford
Data Processor
University of Oxford

Dataset Types: Health and disease


Collection Sources: Community, Secondary care - In-patients, Primary care - Clinic