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Lothian Primary and Secondary Care with Phenotypes
Population Size
Not reported
Years
1996
Associated BioSamples
None/not available
Geographic coverage
United Kingdom
Scotland
...see more
Lead time
Not applicable
Summary
A curated dataset that integrates the codes used by NHS Lothian GPs and hospitals/facilities – along with national records – to summarise patient conditions based on the defined standards from the HDR UK Phenotype Library.
Documentation
Primary care, secondary care (Scottish Morbidity Records) and deaths data (NRS) where ICD10, OPCS and Read2 codes are mapped to Caliber phenotypes. Only records that can be mapped to Caliber Phenotypes are included in this dataset.
Dataset type
Health and disease
Dataset sub-type
Not applicable
Keywords
DataLoch, GP, Read Codes, SMR, Scottish Morbidity, CALIBER, Health Conditions, HDR UK Phenotypes, SIMD, Public Health Scotland, PHS
Observations
Observed Node | Disambiguating Description | Measured Value | Measured Property | Observation Date |
|---|---|---|---|---|
Findings | Number of Caliber phentoype codes assigned to GP ReadCode events. A single patient interaction event can have multiple phenotype codes assigned. | 10000000 | Count | 17 Aug 2022 |
Findings | Number of Caliber phentoype codes assigned to SMR events. A single SMR event can have multiple phenotype codes assigned. | 11500000 | Count | 17 Aug 2022 |
Findings | Number of Caliber phentoype codes assigned to NRS Death events. A single death event can have multiple phenotype codes assigned. | 4500000 | Count | 17 Aug 2022 |
Provenance
Collection source setting
Primary care - Clinic, Secondary care - Accident and Emergency, Secondary care - Outpatients, Secondary care - In-patients
Image contrast
Not stated
Biological sample availability
None/not available
Details
Publishing frequency
Monthly
Version
1.0.0
Modified
08/10/2024
Citation Requirements
NHS Lothian, Public Health Scotland, Lothian GP Practices
Coverage
Start date
01/01/1996
Time lag
Variable
Geographic coverage
United Kingdom, Scotland, City of Edinburgh, East Lothian, West Lothian, Midlothian
Maximum age range
150
Follow-up
Other
Accessibility
Language
en
Controlled vocabulary
OPCS4, ICD10, READ
Format
text/csv
Data Access Request
Dataset pipeline status
Not available
Access rights
Time to dataset access
Not applicable
Access request cost
Access service description
Jurisdiction
GB-SCT
Data use limitation
Project-specific restrictions
Data Controller
Lothian GP Practices, NHS Lothian, Public Health Scotland
Data Processor
University of Edinburgh