HDR Gateway logo
HDR Gateway logo

Bookmarks

Synthetic Data: Acute Atrial Fibrillation Patient Profiles, Clinical Insights

Population Size

24,800

People

Years

2017 - 2021

Associated BioSamples

None/not available

Geographic coverage

https://www.geonames.org/2634343/west-midlands.html

Lead time

1-2 months

Summary

A synthetic dataset featuring patient-level information for >24,000 acute admissions with atrial fibrillation, including demographics, co-morbidities, symptoms, investigations, medications and outcomes, derived from real patient records.

Documentation

Atrial fibrillation (AF) is a common abnormal heart rhythm that causes the heart to beat irregularly and often too fast. AF increases the risk of stroke and heart failure. AF primarily affects older adults and individuals with chronic conditions such as heart disease, high blood pressure, or obesity. Additional factors include congenital heart disease, and cardiomyopathy. AF can be treated by ablation or controlled using medication. The risk of stroke can be reduced using anti-coagulants.

This synthetic AF dataset comprises of 24.8k “patients” including demographics, co-morbidities, presenting symptoms and medical events during hospital stays, coded with ICD-10 and SNOMED-CT.

Using the Synthetic Data Vault package with a GAN synthesizer, a synthetic dataset was generated from real clinical data. The dataset includes demographic information and hospital admission details. The real data was pre-processed for correct datetime parsing and metadata was defined to capture schema structure, guiding the synthesizer in learning data distributions and relationships. The resulting synthetic dataset closely mirrors the statistical properties of the original, supporting privacy-preserving analysis and model training.

Geography: The West Midlands has a population of 6 million & includes a diverse ethnic & socio-economic mix. UHB is one of the largest NHS Trusts in England, providing direct acute services & specialist care across four hospital sites, with 2.2 million patient episodes per year, 2750 beds & > 120 ITU bed capacity. UHB runs a fully electronic healthcare record (PICS; Birmingham Systems), a shared primary & secondary care record (Your Care Connected) & a patient portal “My Health”.

Data set availability: Data access is available via the PIONEER Hub for projects which will benefit the public or patients. This can be by developing a new understanding of disease, by providing insights into how to improve care, or by developing new models, tools, treatments, or care processes. Data access can be provided to NHS, academic, commercial, policy and third sector organisations. Applications from SMEs are welcome. There is a single data access process, with public oversight provided by our public review committee, the Data Trust Committee. Contact pioneer@uhb.nhs.uk or visit www.pioneerdatahub.co.uk for more details.

Available supplementary data: Matched controls; ambulance and community data. Unstructured data (images). We can provide the dataset in OMOP and other common data models.

Available supplementary support: Analytics, model build, validation & refinement; A.I. support. Data partner support for ETL (extract, transform & load) processes. Bespoke and “off the shelf” Trusted Research Environment (TRE) build and run. Consultancy with clinical, patient & end-user and purchaser access/ support. Support for regulatory requirements. Cohort discovery. Data-driven trials and “fast screen” services to assess population size.

Dataset type
Health and disease, Measurements/Tests, Lifestyle
Dataset sub-type
Not applicable
Dataset population size
24800

Keywords

Atrial Fibrillation, AF, Synthetic data, acute admissions, comorbidities, clinical symptoms, cardiovascular, medications

Observations

Observed Node
Disambiguating Description
Measured Value
Measured Property
Observation Date

Persons

24800 spells for patients with AF between 19/11/2017 and 16/01/2021

24800

Count

26 Sep 2022

Provenance

Purpose of dataset collection
Care
Source of data extraction
Machine generated
Collection source setting
Secondary care - Accident and Emergency
Patient pathway description
Data is representative of the multi-ethnicity population within the West Midlands (42% non white). Data includes all patients admitted during this timeframe, with National data Opt Outs applied, and therefore is representative of admissions to secondary care. Data focuses on in-patient stay in hospital during the acute episode but can be supplemented on request to include previous and subsequent hospital contacts (including outpatient appointments) and ambulance, 111, 999 data.
Image contrast
Not stated
Biological sample availability
None/not available

Structural Metadata

Details

Publishing frequency
Quarterly
Version
1.0.0
Modified

02/12/2024

Distribution release date

02/12/2024

Citation Requirements
This publication uses data from PIONEER, an ethically approved database and analytical environment (East Midlands Derby Research Ethics 20/EM/0158)

Coverage

Start date

19/11/2017

End date

16/01/2021

Time lag
Other
Maximum age range
120
Follow-up
1 - 10 Years

Accessibility

Language
en
Alignment with standardised data models
LOCAL
Controlled vocabulary
SNOMED CT, ICD10, OPCS4
Format
SQL

Data Access Request

Dataset pipeline status
Available
Time to dataset access
1-2 months
Access request cost
www.pioneerdatahub.co.uk/data/data-services-costs/
Access method category
TRE/SDE
Access service description

Trusted Research Environments (TRE) are built using Microsoft Azure services and hosted in the UK to provide research teams a safe, secure and agile environment which allows users to quickly analyse, interpret and form an enriched view of primary care information through a range of integrated datasets.

Health data collated from multiple sources is ingested into a secure data lake which will then allow subsets of data to be made available to research teams on approval of a data request. Once approved a customer specific TRE is made available with a standard set of leading analytical tools from Microsoft including Azure Databricks, Azure Machine Learning, Azure SQL and Azure Synapse (for large-scale data warehouses). Specific tools can be provided at an additional cost over the standard platform data access charge and the PIONEER team will work with you to determine your exact needs.

Access to the TRE is managed using the latest virtual desktop technology to provide a safe and secure end-user experience. By utilising leading edge design PIONEER are able to create TREs rapidly to enable us to service any customer requirement.

Jurisdiction
GB-ENG
Data use limitation
General research use
Data use requirements
Project-specific restrictions
Data Controller
University Hospitals Birmingham NHS Foundation Trust
Data Processor
NOT APPLICABLE

Dataset Types: Health and disease, Measurements/Tests, Lifestyle


Collection Sources: Secondary care - Accident and Emergency